Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9971508 chr11:49656382 G/A FOLH1B chr11:89372395-89431886:+ -0.34 -6.23 1.01E-9 Box Plot
THCA rs9973833 chr2:132272563 C/T CCDC74B chr2:130896860-130902707:- 0.4 7.16 3.1E-12 Box Plot
THCA rs9973837 chr2:132272664 C/T CCDC74B chr2:130896860-130902707:- 0.4 7.16 3.1E-12 Box Plot
THCA rs9973902 chr2:132272512 A/T CCDC74B chr2:130896860-130902707:- 0.4 7.16 3.1E-12 Box Plot
THCA rs9974270 chr21:18944881 G/A CXADRP3 chr18:14477954-14499277:- 0.59 8.03 7.78E-15 Box Plot
THCA rs998243 chr5:72470853 T/C MPP5 chr14:67707826-67802536:+ 0.17 5.91 6.34E-9 Box Plot
THCA rs9986382 chr6:26550619 T/C ZNF322B chr9:99957633-99961910:- 0.57 11.02 2.67E-25 Box Plot
THCA rs9986596 chr6:28219661 G/A BTN3A2 chr6:26365387-26378548:+ -0.54 -10.31 1.17E-22 Box Plot
THCA rs998683 chr8:11353000 A/G SGK223 chr8:8175258-8244008:- 0.38 6.66 7.76E-11 Box Plot
THCA rs9987295 chr8:23307854 G/A FAM22F chr9:97080478-97090926:- -0.39 -6.12 2.01E-9 Box Plot
THYM rs10035180 chr5:176598502 A/G LOC388955 chr2:63849182-63850159:- -0.56 -7.66 1.59E-11 Box Plot
THYM rs10036193 chr5:176568520 G/C LOC388955 chr2:63849182-63850159:- -0.57 -7.74 1.07E-11 Box Plot
THYM rs10036760 chr5:176574676 C/T LOC388955 chr2:63849182-63850159:- -0.78 -11.03 1.08E-18 Box Plot
THYM rs10037055 chr5:176691279 G/T LOC388955 chr2:63849182-63850159:- -0.58 -8.52 2.33E-13 Box Plot
THYM rs10039241 chr5:176578072 G/A LOC388955 chr2:63849182-63850159:- -0.69 -9.96 2.03E-16 Box Plot